Yuzhou Chang

Yuzhou Chang

His/Him

I am a computational biologist interested in spatial omics, graph signal processing, foundation models, and immuno-oncology. Welcome to connect.

Software

Open-Source Software

SpaGFT

A graph Fourier transform framework for spatial omics — characterizing tissue modules and spatially variable genes.

github.com/OSU-BMBL/SpaGFT

RESEPT

Deep-learning framework for tissue architecture identification from spatial transcriptomics.

github.com/OSU-BMBL/RESEPT

BioGSP (R)

Graph signal processing toolkit for biological data analysis, R implementation.

github.com/BMEngineeR/BioGSP

KRONOS

Foundation model framework for spatial proteomics. Collaboration with Mahmood Lab.

github.com/mahmoodlab/KRONOS

pycodex

Python toolkit for CODEX multiplexed imaging analysis. Built and maintained by Wenrui Wu — sharing here as a highly useful resource.

github.com/BMEngineeR/pycodex

For all open-source projects, please visit my GitHub profile.